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Sample GSM1690714 Query DataSets for GSM1690714
Status Public on May 20, 2015
Title gray-00298: b0372-scan
Sample type genomic
 
Channel 1
Source name Cancer
Organism Homo sapiens
Characteristics chemotherapy treatment: yes
p53 positive (ihc): yes
Sex: female
erbb2 positive (ihc): yes
distal recurrence: yes
distal recurrence time: 0.67
organism part: mammary gland
family history: yes
followup time: 0.67
ethnicity: African American
dead of disease: yes
tumor grading: 1
tumor staging: 2
disease state: breast cancer
hormonal therapy: no
estrogen receptor status: negative
biosource type: frozen_sample
progesterone receptor status: negative
alive at endpoint: dead
node positive: yes
age at diagnosis: 31
recurrence time: 0.67
tumor size (mm): 4.5
recurrence: yes
radiation treatment: yes
Extracted molecule genomic DNA
Extraction protocol See mage-tab files linked to series entry for additional details
Label Cy3
Label protocol See mage-tab files linked to series entry for additional details
 
Channel 2
Source name normal female genomic DNA
Organism Homo sapiens
Characteristics gender: female
Extracted molecule genomic DNA
Extraction protocol See mage-tab files linked to series entry for additional details
Label Cy5
Label protocol See mage-tab files linked to series entry for additional details
 
 
Hybridization protocol See mage-tab files linked to series entry for additional details
Scan protocol See mage-tab files linked to series entry for additional details
Description Array Type: HA114
Data processing See mage-tab files linked to series entry for additional details
 
Submission date May 19, 2015
Last update date May 20, 2015
Contact name Mervi Heiskanen
E-mail(s) mervi.heiskanen@nih.gov
Phone 2402765175
Organization name NCI
Department CBIIT
Street address 9609 Medical Center Drive, 1W378
City Rockville
State/province MD
ZIP/Postal code 20850
Country USA
 
Platform ID GPL20217
Series (1)
GSE69035 caArray_gray-00298: Genomic and transcriptional aberrations linked to breast cancer pathophysiologies - Genome Copy Number (Scanning and OncoBAC)

Supplementary file Size Download File type/resource
GSM1690714_5sdmar29B372_takuspot.txt.gz 748.5 Kb (ftp)(http) TXT
Processed data provided as supplementary file

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