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Sample GSM1687395 Query DataSets for GSM1687395
Status Public on May 01, 2018
Title Dermis from healthy skin, sample 2, set 2
Sample type RNA
Source name Human healthy dermis (laser capture microdissection), sample 2
Organism Homo sapiens
Characteristics disease state: control
tissue: dermis
gender: female
age: 36y
Extracted molecule total RNA
Extraction protocol RNA was isolated with Arcturus Picopure RNA isolation Kit according to manufacturer's protocol
Label Cy3
Label protocol 10 ng RNA were amplified with ExpressArt Kit and labeled (Cy3) with One-color microarray-based Gene Expression Analysis Low Input Quick Amp WT Labeling (Agilent Technologies) according to manufacturer's protocol
Hybridization protocol 1.5 ug of Cy3-labelled cRNA was hybridized with Human Gene Expression Microarray 8x60K chip (Agilent Technologies) according to manufacturer's protocol
Scan protocol Slides were scanned with the Agilent G2505B scanner.
Description Gene expression in human healthy dermis
Data processing Images were quantified using Agilent Feature Extraction Software (version V. Data were background-corrected with 'normexp' option and quantile normalized using limma R package.
Submission date May 15, 2015
Last update date May 01, 2018
Contact name Denis A Mogilenko
Organization name INSERM
Department U1011
Street address 1 Rue du Professeur Calmette, BP245
City Lille
ZIP/Postal code 59019
Country France
Platform ID GPL13607
Series (1)
GSE68939 Gene epression in healthy and lesional psoriatic dermis from human skin biopsies (laser capture microdissection): set 2

Data table header descriptions
VALUE Normalized Log2 signal intensity

Data table
1 15.72320932
2 5.068810263
3 4.692831343
4 7.2494761
5 6.001424952
6 6.447302203
7 8.556748377
8 10.93616917
9 5.324207342
10 6.715114227
11 5.011819605
12 9.043063505
13 9.151177026
14 11.449594
15 6.609743796
16 4.952484729
17 6.173192291
18 4.952484729
19 5.148252612
20 7.749958192

Total number of rows: 62976

Table truncated, full table size 1090 Kbytes.

Supplementary file Size Download File type/resource
GSM1687395_CN2Dh.txt.gz 12.3 Mb (ftp)(http) TXT
Processed data included within Sample table

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