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Sample GSM1687393 Query DataSets for GSM1687393
Status Public on May 01, 2018
Title Lesional dermis from psoriatic skin, sample 10, set 2
Sample type RNA
Source name Human lesional psoriatic dermis (laser capture microdissection), sample 10
Organism Homo sapiens
Characteristics disease state: psoriasis
tissue: dermis
gender: male
age: 51y
Extracted molecule total RNA
Extraction protocol RNA was isolated with Arcturus Picopure RNA isolation Kit according to manufacturer's protocol
Label Cy3
Label protocol 10 ng RNA were amplified with ExpressArt Kit and labeled (Cy3) with One-color microarray-based Gene Expression Analysis Low Input Quick Amp WT Labeling (Agilent Technologies) according to manufacturer's protocol
Hybridization protocol 1.5 ug of Cy3-labelled cRNA was hybridized with Human Gene Expression Microarray 8x60K chip (Agilent Technologies) according to manufacturer's protocol
Scan protocol Slides were scanned with the Agilent G2505B scanner.
Description Gene expression in human lesional psoriatic dermis
Data processing Images were quantified using Agilent Feature Extraction Software (version V. Data were background-corrected with 'normexp' option and quantile normalized using limma R package.
Submission date May 15, 2015
Last update date May 01, 2018
Contact name Denis A Mogilenko
Organization name INSERM
Department U1011
Street address 1 Rue du Professeur Calmette, BP245
City Lille
ZIP/Postal code 59019
Country France
Platform ID GPL13607
Series (1)
GSE68939 Gene epression in healthy and lesional psoriatic dermis from human skin biopsies (laser capture microdissection): set 2

Data table header descriptions
VALUE Normalized Log2 signal intensity

Data table
1 15.84991482
2 4.698398754
3 4.966395586
4 6.873607065
5 5.448347419
6 6.488052912
7 8.196052453
8 11.05742539
9 4.725918026
10 6.183153872
11 5.131887577
12 8.708784708
13 9.038269477
14 12.15575532
15 5.732357238
16 4.938438434
17 5.915598438
18 4.851161557
19 5.448347419
20 7.713305702

Total number of rows: 62976

Table truncated, full table size 1088 Kbytes.

Supplementary file Size Download File type/resource
GSM1687393_PN10DL.txt.gz 12.3 Mb (ftp)(http) TXT
Processed data included within Sample table

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