GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Sample GSM1687382 Query DataSets for GSM1687382
Status Public on Jun 14, 2017
Title Epidermis from healthy skin, sample 2, set 2
Sample type RNA
Source name Human healthy epidermis (laser capture microdissection), sample 2
Organism Homo sapiens
Characteristics disease state: control
tissue: epidermis
gender: female
age: 36y
Extracted molecule total RNA
Extraction protocol RNA was isolated with Arcturus Picopure RNA isolation Kit according to manufacturer's protocol
Label Cy3
Label protocol 10 ng RNA were amplified with ExpressArt Kit and labeled (Cy3) with One-color microarray-based Gene Expression Analysis Low Input Quick Amp WT Labeling (Agilent Technologies) according to manufacturer's protocol
Hybridization protocol 1.5 ug of Cy3-labelled cRNA was hybridized with Human Gene Expression Microarray 8x60K chip (Agilent Technologies) according to manufacturer's protocol
Scan protocol Slides were scanned with the Agilent G2505B scanner.
Description Gene expression in human healthy epidermis
Data processing Images were quantified using Agilent Feature Extraction Software (version V. Data were background-corrected with 'normexp' option and quantile normalized using limma R package.
Submission date May 15, 2015
Last update date Jun 14, 2017
Contact name Denis A Mogilenko
Organization name INSERM
Department U1011
Street address 1 Rue du Professeur Calmette, BP245
City Lille
ZIP/Postal code 59019
Country France
Platform ID GPL13607
Series (1)
GSE68937 Gene expression in healthy and lesional psoriatic epidermis from human skin biopsies (laser capture microdissection): set 2

Data table header descriptions
VALUE Normalized Log2 signal intensity

Data table
1 16.06899734
2 5.258182626
3 4.962907314
4 6.094962538
5 5.622669126
6 6.38838033
7 8.574357926
8 11.79313767
9 5.325689024
10 6.45293161
11 5.355359712
12 7.746375998
13 8.482892954
14 11.70023209
15 6.515375174
16 4.871403964
17 6.325309853
18 6.287332125
19 5.45465006
20 7.596968014

Total number of rows: 62976

Table truncated, full table size 1090 Kbytes.

Supplementary file Size Download File type/resource
GSM1687382_CN2Eh.txt.gz 12.3 Mb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap