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Sample GSM1687381 Query DataSets for GSM1687381
Status Public on Jun 14, 2017
Title Epidermis from healthy skin, sample 1, set 2
Sample type RNA
Source name Human healthy epidermis (laser capture microdissection), sample 1
Organism Homo sapiens
Characteristics disease state: control
tissue: epidermis
gender: female
age: 51y
Extracted molecule total RNA
Extraction protocol RNA was isolated with Arcturus Picopure RNA isolation Kit according to manufacturer's protocol
Label Cy3
Label protocol 10 ng RNA were amplified with ExpressArt Kit and labeled (Cy3) with One-color microarray-based Gene Expression Analysis Low Input Quick Amp WT Labeling (Agilent Technologies) according to manufacturer's protocol
Hybridization protocol 1.5 ug of Cy3-labelled cRNA was hybridized with Human Gene Expression Microarray 8x60K chip (Agilent Technologies) according to manufacturer's protocol
Scan protocol Slides were scanned with the Agilent G2505B scanner.
Description Gene expression in human healthy epidermis
Data processing Images were quantified using Agilent Feature Extraction Software (version V. Data were background-corrected with 'normexp' option and quantile normalized using limma R package.
Submission date May 15, 2015
Last update date Jun 14, 2017
Contact name Denis A Mogilenko
Organization name INSERM
Department U1011
Street address 1 Rue du Professeur Calmette, BP245
City Lille
ZIP/Postal code 59019
Country France
Platform ID GPL13607
Series (1)
GSE68937 Gene expression in healthy and lesional psoriatic epidermis from human skin biopsies (laser capture microdissection): set 2

Data table header descriptions
VALUE Normalized Log2 signal intensity

Data table
1 15.82392955
2 4.724527194
3 4.778089984
4 5.651656715
5 5.457388906
6 6.073700528
7 8.266494902
8 11.42036612
9 5.019601601
10 6.41820813
11 5.593087135
12 7.526990118
13 8.66422591
14 11.65797908
15 6.439142344
16 5.23283
17 6.40266098
18 7.033655111
19 5.177429284
20 7.640698605

Total number of rows: 62976

Table truncated, full table size 1089 Kbytes.

Supplementary file Size Download File type/resource
GSM1687381_CN1Eh.txt.gz 12.3 Mb (ftp)(http) TXT
Processed data included within Sample table

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