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Sample GSM1687378 Query DataSets for GSM1687378
Status Public on Jun 14, 2017
Title Lesional epidermis from psoriatic skin, sample 7, set 2
Sample type RNA
Source name Human lesional psoriatic epidermis (laser capture microdissection), sample 7
Organism Homo sapiens
Characteristics disease state: psoriasis
tissue: epidermis
gender: male
age: 41y
Extracted molecule total RNA
Extraction protocol RNA was isolated with Arcturus Picopure RNA isolation Kit according to manufacturer's protocol
Label Cy3
Label protocol 10 ng RNA were amplified with ExpressArt Kit and labeled (Cy3) with One-color microarray-based Gene Expression Analysis Low Input Quick Amp WT Labeling (Agilent Technologies) according to manufacturer's protocol
Hybridization protocol 1.5 ug of Cy3-labelled cRNA was hybridized with Human Gene Expression Microarray 8x60K chip (Agilent Technologies) according to manufacturer's protocol
Scan protocol Slides were scanned with the Agilent G2505B scanner.
Description Gene expression in human lesional psoriatic epidermis
Data processing Images were quantified using Agilent Feature Extraction Software (version V. Data were background-corrected with 'normexp' option and quantile normalized using limma R package.
Submission date May 15, 2015
Last update date Jun 14, 2017
Contact name Denis A Mogilenko
Organization name INSERM
Department U1011
Street address 1 Rue du Professeur Calmette, BP245
City Lille
ZIP/Postal code 59019
Country France
Platform ID GPL13607
Series (1)
GSE68937 Gene expression in healthy and lesional psoriatic epidermis from human skin biopsies (laser capture microdissection): set 2

Data table header descriptions
VALUE Normalized Log2 signal intensity

Data table
1 15.93615146
2 5.133580422
3 4.911902992
4 5.651656715
5 5.943008873
6 5.956623838
7 9.839433842
8 10.84465692
9 5.261320606
10 5.977762523
11 5.00843958
12 7.772178703
13 7.627079625
14 11.2249188
15 7.303212182
16 5.177429284
17 6.316285958
18 6.1107059
19 5.622669126
20 7.196604531

Total number of rows: 62976

Table truncated, full table size 1087 Kbytes.

Supplementary file Size Download File type/resource
GSM1687378_PN7EL.txt.gz 12.4 Mb (ftp)(http) TXT
Processed data included within Sample table

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