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Sample GSM1626338 Query DataSets for GSM1626338
Status Public on Sep 28, 2015
Title AG1BM64_rep1
Sample type RNA
Source name Mixed RNA of both (1:64)
Organism Homo sapiens
Characteristics sample type: 1:64 mixture of AGO and BMO
Extracted molecule total RNA
Extraction protocol Samples used in the study are commercially available RNAs derived from mixture of multiple cell lines and RNAs extracted from patient bone marrow specimens
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description rep1
Data processing The image-derived data were processed with Illumina GenomeStudio
Data values are background subtracted and quantile normalized in linear scale for Matrix normalized and are background retained and non-normalized in linear scale for Matrix non-normalized.
Submission date Mar 06, 2015
Last update date Sep 28, 2015
Contact name Jinsheng Yu
Organization name Washington University School of Medicine
Department Genetics
Lab GTAC Lab
Street address 660 S. Euclid Ave.
City St. Louis
State/province MO
ZIP/Postal code 63110
Country USA
Platform ID GPL10558
Series (2)
GSE66614 Multi-platform assessment of transcriptional profiling technologies utilizing a precise probe mapping methodology (Illumina_HT12)
GSE66649 Multi-platform assessment of transcriptional profiling technologies utilizing a precise probe mapping methodology

Data table header descriptions
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 1.892138 0.3948052
ILMN_2055271 -1.239548 0.5662338
ILMN_1736007 -3.381174 0.6844156
ILMN_2383229 28.26019 0.007792208
ILMN_1806310 52.13033 0
ILMN_1779670 -5.663741 0.7922078
ILMN_1653355 12.76133 0.07402597
ILMN_1717783 -7.511264 0.8636364
ILMN_1705025 -3.235007 0.6779221
ILMN_1814316 -2.20434 0.6220779
ILMN_2359168 -1.177157 0.5623376
ILMN_1731507 1.095845 0.4402598
ILMN_1787689 6.353763 0.1948052
ILMN_3241953 7.496907 0.1597403
ILMN_1745607 6.362784 0.1935065
ILMN_2136495 1.584828 0.4155844
ILMN_1668111 -8.4992 0.9025974
ILMN_2295559 0.9706341 0.448052
ILMN_1735045 86.32885 0
ILMN_1680754 13.80099 0.05714286

Total number of rows: 47306

Table truncated, full table size 1399 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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