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Sample GSM1626334 Query DataSets for GSM1626334
Status Public on Sep 28, 2015
Title AG1BM4_rep2
Sample type RNA
 
Source name Mixed RNA of both (1:4)
Organism Homo sapiens
Characteristics sample type: 1:4 mixture of AGO and BMO
Extracted molecule total RNA
Extraction protocol Samples used in the study are commercially available RNAs derived from mixture of multiple cell lines and RNAs extracted from patient bone marrow specimens
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description rep2
Data processing The image-derived data were processed with Illumina GenomeStudio
Data values are background subtracted and quantile normalized in linear scale for Matrix normalized and are background retained and non-normalized in linear scale for Matrix non-normalized.
 
Submission date Mar 06, 2015
Last update date Sep 28, 2015
Contact name Jinsheng Yu
E-mail(s) jyu@wustl.edu
Organization name Washington University School of Medicine
Department Genetics
Lab GTAC Lab
Street address 660 S. Euclid Ave.
City St. Louis
State/province MO
ZIP/Postal code 63110
Country USA
 
Platform ID GPL10558
Series (2)
GSE66614 Multi-platform assessment of transcriptional profiling technologies utilizing a precise probe mapping methodology (Illumina_HT12)
GSE66649 Multi-platform assessment of transcriptional profiling technologies utilizing a precise probe mapping methodology

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 -6.264496 0.8246753
ILMN_2055271 8.188923 0.1
ILMN_1736007 3.524181 0.2532468
ILMN_2383229 71.72015 0
ILMN_1806310 71.85692 0
ILMN_1779670 2.473459 0.3038961
ILMN_1653355 5.368029 0.1883117
ILMN_1717783 -12.60948 0.9948052
ILMN_1705025 1.284774 0.374026
ILMN_1814316 -0.01099558 0.4428571
ILMN_2359168 -2.088948 0.574026
ILMN_1731507 -1.655927 0.5363637
ILMN_1787689 -0.3477011 0.4688312
ILMN_3241953 16.80251 0.01298701
ILMN_1745607 178.5176 0
ILMN_2136495 -5.581154 0.7857143
ILMN_1668111 -0.9404961 0.4974026
ILMN_2295559 6.07352 0.1675325
ILMN_1735045 43.61028 0
ILMN_1680754 2.194466 0.3155844

Total number of rows: 47306

Table truncated, full table size 1392 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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