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Sample GSM1626332 Query DataSets for GSM1626332
Status Public on Sep 28, 2015
Title AGO_rep2
Sample type RNA
Source name Original Agilent Human Universal Reference RNA
Organism Homo sapiens
Characteristics sample type: pure reference RNA (AGO)
Extracted molecule total RNA
Extraction protocol Samples used in the study are commercially available RNAs derived from mixture of multiple cell lines and RNAs extracted from patient bone marrow specimens
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description rep2
Data processing The image-derived data were processed with Illumina GenomeStudio
Data values are background subtracted and quantile normalized in linear scale for Matrix normalized and are background retained and non-normalized in linear scale for Matrix non-normalized.
Submission date Mar 06, 2015
Last update date Sep 28, 2015
Contact name Jinsheng Yu
Organization name Washington University School of Medicine
Department Genetics
Lab GTAC Lab
Street address 660 S. Euclid Ave.
City St. Louis
State/province MO
ZIP/Postal code 63110
Country USA
Platform ID GPL10558
Series (2)
GSE66614 Multi-platform assessment of transcriptional profiling technologies utilizing a precise probe mapping methodology (Illumina_HT12)
GSE66649 Multi-platform assessment of transcriptional profiling technologies utilizing a precise probe mapping methodology

Data table header descriptions
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 -3.139969 0.6090909
ILMN_2055271 17.88549 0.006493506
ILMN_1736007 -4.160272 0.6727273
ILMN_2383229 89.18136 0
ILMN_1806310 119.9976 0
ILMN_1779670 -0.6315197 0.4597403
ILMN_1653355 3.505015 0.2233766
ILMN_1717783 -6.429935 0.7974026
ILMN_1705025 -3.77729 0.6493506
ILMN_1814316 -2.440645 0.574026
ILMN_2359168 -0.1499777 0.4363636
ILMN_1731507 -12.11633 0.9805195
ILMN_1787689 6.575117 0.1194805
ILMN_3241953 31.28735 0
ILMN_1745607 222.807 0
ILMN_2136495 -5.357888 0.7441558
ILMN_1668111 -0.8041067 0.4714286
ILMN_2295559 -0.2849538 0.4428571
ILMN_1735045 27.09732 0
ILMN_1680754 7.000235 0.1064935

Total number of rows: 47306

Table truncated, full table size 1371 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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