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Sample GSM1573056 Query DataSets for GSM1573056
Status Public on Jun 03, 2015
Title Temporal of subject 131 (Sample216)
Sample type genomic
Source name Brain Temporal
Organism Homo sapiens
Characteristics tissue: Brain Temporal
subject id: 131
Sex: F
predicted gender: female
age: 111
dna methylation age: 70.976213959431
age acceleration with respect to noncerebellar samples: -12.3408854795007
cor sample vs gold standard: 0.888517455393899
mean abs difference sample vs gold standard: 0.0870121500129711
postmortem interval: 16
Growth protocol DNA extracted from fresh frozen tissue
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from fresh frozen tissue using the AllPrep DNA/RNA mini kit according to standard instructions.
Label Cy3 and Cy5
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Data processing BeadStudio software v3.2.
Unmethylated and methylated signal intensities and detection p values included in Series supplementary file
Submission date Dec 24, 2014
Last update date Jun 03, 2015
Contact name Steve Horvath
Organization name University of California, Los Angeles
Department Human Genetics
Lab Horvath
Street address 695 Charles E. Young Drive South, Box 708822
City Los Angeles
State/province CA
ZIP/Postal code 90095-7088
Country USA
Platform ID GPL13534
Series (2)
GSE64509 DNA methylation profiles of human brain tissue samples
GSE64511 DNA methylation profiles of multiple human tissues

Data table header descriptions
VALUE Background corrected beta values resulting from BeadStudio

Data table
cg00000029 0.4608501
cg00000108 0.9217936
cg00000109 0.6638974
cg00000165 0.1590326
cg00000236 0.7908074
cg00000289 0.4165721
cg00000292 0.72439
cg00000321 0.5287145
cg00000363 0.168625
cg00000622 0.01769994
cg00000658 0.8070378
cg00000714 0.1263982
cg00000721 0.9044596
cg00000734 0.05598756
cg00000769 0.03436871
cg00000807 0.8987745
cg00000884 0.7950983
cg00000905 0.116474
cg00000924 0.709374
cg00000948 0.9142064

Total number of rows: 485577

Table truncated, full table size 10022 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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