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Sample GSM1568493 Query DataSets for GSM1568493
Status Public on Mar 24, 2015
Title H3K4me1 ChIPseq - wild2
Sample type SRA
Source name E14.5 Liver
Organism Mus musculus
Characteristics strain: FVB
tissue: Liver
developmental stage: E14.5
genotype/variation: Wildtype
gender: Male
Extracted molecule genomic DNA
Extraction protocol Single end
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina NextSeq 500
Data processing Libraries were subsampled to equal read counts and mapped with BWA using default paramaters.
Genome_build: mm9
Supplementary_files_format_and_content: Wiggle plot showing density of mapped ChIP-seq reads in 32 bp windows
Submission date Dec 18, 2014
Last update date May 15, 2019
Contact name Harald Oey
Organization name La Trobe University
Department Genetics
Street address Kingsbury Drive
City Bundoora
State/province Vic
ZIP/Postal code 3086
Country Australia
Platform ID GPL19057
Series (1)
GSE58108 Rlf, a widely-spaced zinc finger protein, is involved in maintaining epigenetic marks at CpG island shores and enhancer elements across the genome
BioSample SAMN03268478
SRA SRX835930

Supplementary file Size Download File type/resource 104.2 Mb (ftp)(http) BW
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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