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Sample GSM154684 Query DataSets for GSM154684
Status Public on Jan 11, 2007
Title 18 week placenta basal plate 1 B
Sample type RNA
 
Source name placental basal plate
Organism Homo sapiens
Characteristics Placenta, basal plate
Extracted molecule total RNA
Extraction protocol Clin Chem. 2006 Jan;52(1):159-60. Modification of the Standard Trizol-Based Technique Improves the Integrity of RNA Isolated from RNase-Rich Placental Tissue. Haimov-Kochman R, Fisher SJ, Winn VD.)
Label biotin
Label protocol Approximately 2 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description 18 week placenta basal plate
Data processing Affymetrix Microarray Suite version 5.0
 
Submission date Jan 10, 2007
Last update date Jan 10, 2007
Contact name Susan Fisher
Organization name UCSF
Department Obstretrics, Gynecology and Reproductive Sciences
Lab Fisher
Street address 513 PARNASSUS AVE
City SAN FRANCISCO
State/province CA
ZIP/Postal code 94143
Country USA
 
Platform ID GPL97
Series (1)
GSE5999 Characterization of Gene Expression At the Human Maternal-Fetal Interface

Data table header descriptions
ID_REF
VALUE RMA
DETECTION P-VALUE 0.05

Data table
ID_REF VALUE DETECTION P-VALUE
200000_s_at 8.61021 1
200001_at 10.143157 1
200002_at 10.721292 1
200003_s_at 11.113009 1
200004_at 10.609042 1
200005_at 8.965911 1
200006_at 10.056076 1
200007_at 10.324498 1
200008_s_at 8.45216 1
200009_at 9.581422 1
200010_at 10.878001 1
200011_s_at 8.572471 1
200012_x_at 10.864893 1
200013_at 10.653392 1
200014_s_at 8.799689 1
200015_s_at 8.753893 1
200016_x_at 10.799289 0.768
200017_at 10.751475 1
200018_at 11.594595 1
200019_s_at 9.958622 1

Total number of rows: 22577

Table truncated, full table size 469 Kbytes.




Supplementary file Size Download File type/resource
GSM154684.cel.gz 3.2 Mb (ftp)(http) CEL

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