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Sample GSM154658 Query DataSets for GSM154658
Status Public on Jan 11, 2007
Title 21 week placenta basal plate 2 A
Sample type RNA
 
Source name placental basal plate
Organism Homo sapiens
Characteristics Placenta, basal plate
Extracted molecule total RNA
Extraction protocol Clin Chem. 2006 Jan;52(1):159-60. Modification of the Standard Trizol-Based Technique Improves the Integrity of RNA Isolated from RNase-Rich Placental Tissue. Haimov-Kochman R, Fisher SJ, Winn VD.)
Label biotin
Label protocol Approximately 2 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description 21 week placenta basal plate
Data processing Affymetrix Microarray Suite version 5.0
 
Submission date Jan 10, 2007
Last update date Jan 10, 2007
Contact name Susan Fisher
Organization name UCSF
Department Obstretrics, Gynecology and Reproductive Sciences
Lab Fisher
Street address 513 PARNASSUS AVE
City SAN FRANCISCO
State/province CA
ZIP/Postal code 94143
Country USA
 
Platform ID GPL96
Series (1)
GSE5999 Characterization of Gene Expression At the Human Maternal-Fetal Interface

Data table header descriptions
ID_REF
VALUE RMA
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 8.440558 1
1053_at 4.863567 1
117_at 6.530587 1
121_at 8.640563 1
1255_g_at 3.736999 1
1294_at 6.325908 1
1316_at 5.010409 1
1320_at 5.004565 1
1405_i_at 4.407973 1
1431_at 3.470632 1
1438_at 6.449974 1
1487_at 6.840462 1
1494_f_at 6.616568 1
1598_g_at 9.056721 1
160020_at 8.006808 1
1729_at 6.790816 1
1773_at 5.416094 1
177_at 4.980714 1
179_at 8.552051 1
1861_at 4.558544 1

Total number of rows: 22215

Table truncated, full table size 475 Kbytes.




Supplementary file Size Download File type/resource
GSM154658.cel.gz 2.9 Mb (ftp)(http) CEL

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