GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Sample GSM15412 Query DataSets for GSM15412
Status Public on Jan 30, 2004
Title APL_RA2
Sample type RNA
Source name primary APL cells treated with ATRA
Organism Homo sapiens
Extracted molecule total RNA
Description Sample from a leukopharesis of a patient with acute promyelocytic leukemia (APL) with a t(15;17) and a white blood cell count of 185,000 with 97% myeloblasts at diagnosis treated with 1uM ATRA for 5 days. Target preparation and hybridization as described in Stegmaier et al., Nature Genetics 2004.
Keywords = APL Leukemia
Submission date Jan 16, 2004
Last update date May 28, 2005
Contact name Ken Ross
Phone 617-714-7473
Fax 617-714-8955
Organization name Broad Institute
Department Cancer Genomics
Lab Golub Lab
Street address 7 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
Platform ID GPL96
Series (2)
GSE976 Gene Expression-Based High Throughput Screening: APL Treatment with Candidate Compounds
GSE995 Differentiation of acute myeloid leukemia cells

Data table header descriptions
VALUE Affymetrix GeneChip MAS5 Signal
ABS_CALL Affymetrix GeneChip MAS5 A,M, or P Call

Data table
AFFX-BioB-5_at 6.1 A
AFFX-BioB-M_at 5.0 A
AFFX-BioB-3_at 3.3 A
AFFX-BioC-5_at 32.2 A
AFFX-BioC-3_at 3.9 A
AFFX-BioDn-5_at 2.4 A
AFFX-BioDn-3_at 163.3 A
AFFX-CreX-5_at 1.9 A
AFFX-CreX-3_at 22.2 A
AFFX-DapX-5_at 3.5 A
AFFX-DapX-M_at 15.6 A
AFFX-DapX-3_at 5.1 A
AFFX-LysX-5_at 1.1 A
AFFX-LysX-M_at 6.0 A
AFFX-LysX-3_at 15.9 A
AFFX-PheX-5_at 3.1 A
AFFX-PheX-M_at 2.4 A
AFFX-PheX-3_at 33.0 A
AFFX-ThrX-5_at 5.5 A
AFFX-ThrX-M_at 21.0 A

Total number of rows: 22283

Table truncated, full table size 395 Kbytes.

Supplementary file Size Download File type/resource
GSM15412.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap