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Sample GSM1501084 Query DataSets for GSM1501084
Status Public on Nov 03, 2014
Title Human liver expression data from subject S11a157f2
Sample type RNA
 
Source name liver tissue
Organism Homo sapiens
Characteristics subjectid: S11a157f2
Sex: male
age: 47
bmi: 24.4
diseasestatus: NASH
Treatment protocol not applicable
Growth protocol liver biopsy
Extracted molecule total RNA
Extraction protocol For homogenisation of five to ten milligram frozen tissue and subsequent nucleic acid isolation, tubes with 1,4 mm ceramic beads (Precellys, Villeurbanne, France) and the AllPrep DNA/RNA Mini Kit (QIAGEN, Hilden, Germany) were used.
Label biotin
Label protocol labelled by biotin according to the manufacturers protocols
 
Hybridization protocol according to the manufacturers protocols
Scan protocol according to the manufacturers protocols
Description Gene expression data from human liver tissue
Data processing RMA normalization with Bioconductor package oligo
Reported values are log2 RMA normalized gene level expression values from Bioconductor package oligo
 
Submission date Sep 09, 2014
Last update date Nov 04, 2014
Contact name Steve Horvath
E-mail(s) shorvath@altoslabs.com
Organization name University of California, Los Angeles
Department Human Genetics
Lab Horvath
Street address 695 Charles E. Young Drive South, Box 708822
City Los Angeles
State/province CA
ZIP/Postal code 90095-7088
Country USA
 
Platform ID GPL11532
Series (2)
GSE61256 Obesity accelerates epigenetic aging of human liver
GSE61260 Human liver gene expression data from subjects of varying ages

Supplementary file Size Download File type/resource
GSM1501084_A1359-32.CEL.gz 4.2 Mb (ftp)(http) CEL
Processed data are available on Series record

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