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Sample GSM14960 Query DataSets for GSM14960
Status Public on Jan 17, 2004
Title N-22_PRE
Sample type RNA
Source name Left Cardiac Ventricle
Organism Homo sapiens
Extracted molecule total RNA
Description 19 paired human left ventricular apex samples were harvested at the time of implant of a left ventricular assist device (PRE) and at the time of explant (POST). The cohort included patients that were clinically classified as "ischemic" (I) showing evidence of coronary artery disease, "non-ischemic" (N) no evidence of coronary artery disease or "acute Myocardial  infarction" (IM) myocardial infarction within 10 days of the implant. Tissue was processed and hybridized to the Affymetrix HG-U133A chip.
Keywords = Heart, Cardiac, Assist Device, LVAD, GATA-4, Sprouty1, microarray, heart failure
Submission date Jan 07, 2004
Last update date Oct 28, 2005
Contact name Grindle M Suzanne
Phone 612-624-2143
Organization name Lillehei Heart Institute
Department Division of Cardiology
Lab Hall Cardiology
Street address Dwan CVRC 289, MMC 508, 420 Delaware Street SE
City Minneapolis
State/province MN
ZIP/Postal code 55455
Country USA
Platform ID GPL96
Series (1)
GSE974 Left ventricular apex samples

Data table header descriptions
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
AFFX-BioB-5_at 70 P 0.021902
AFFX-BioB-M_at 137.4 P 0.004017
AFFX-BioB-3_at 71.7 P 0.046482
AFFX-BioC-5_at 266.3 P 0.00141
AFFX-BioC-3_at 151.8 P 0.001248
AFFX-BioDn-5_at 179.2 P 0.00039
AFFX-BioDn-3_at 1538.2 P 0.00034
AFFX-CreX-5_at 1887.8 P 0.000044
AFFX-CreX-3_at 3092.8 P 0.000044
AFFX-DapX-5_at 19.9 A 0.123572
AFFX-DapX-M_at 20.9 A 0.139482
AFFX-DapX-3_at 2.1 A 0.794268
AFFX-LysX-5_at 9.6 A 0.250796
AFFX-LysX-M_at 29.2 A 0.227636
AFFX-LysX-3_at 1.7 A 0.41138
AFFX-PheX-5_at 2.9 A 0.686277
AFFX-PheX-M_at 1.8 A 0.963431
AFFX-PheX-3_at 8.1 A 0.617401
AFFX-ThrX-5_at 3.9 A 0.834139
AFFX-ThrX-M_at 4.9 A 0.645547

Total number of rows: 22283

Table truncated, full table size 583 Kbytes.

Supplementary file Size Download File type/resource
GSM14960.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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