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Sample GSM14958 Query DataSets for GSM14958
Status Public on Jan 17, 2004
Title N-2_PRE
Sample type RNA
 
Source name Left Cardiac Ventricle
Organism Homo sapiens
Extracted molecule total RNA
 
Description 19 paired human left ventricular apex samples were harvested at the time of implant of a left ventricular assist device (PRE) and at the time of explant (POST). The cohort included patients that were clinically classified as "ischemic" (I) showing evidence of coronary artery disease, "non-ischemic" (N) no evidence of coronary artery disease or "acute Myocardial  infarction" (IM) myocardial infarction within 10 days of the implant. Tissue was processed and hybridized to the Affymetrix HG-U133A chip.
Keywords = Heart, Cardiac, Assist Device, LVAD, GATA-4, Sprouty1, microarray, heart failure
 
Submission date Jan 07, 2004
Last update date Oct 28, 2005
Contact name Grindle M Suzanne
E-mail(s) grind001@umn.edu
Phone 612-624-2143
Organization name Lillehei Heart Institute
Department Division of Cardiology
Lab Hall Cardiology
Street address Dwan CVRC 289, MMC 508, 420 Delaware Street SE
City Minneapolis
State/province MN
ZIP/Postal code 55455
Country USA
 
Platform ID GPL96
Series (1)
GSE974 Left ventricular apex samples

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 92.1 A 0.0727
AFFX-BioB-M_at 131.4 P 0.004484
AFFX-BioB-3_at 70.9 A 0.123572
AFFX-BioC-5_at 268.3 P 0.001593
AFFX-BioC-3_at 206.2 P 0.00141
AFFX-BioDn-5_at 233 P 0.000095
AFFX-BioDn-3_at 1149.2 P 0.002556
AFFX-CreX-5_at 2614.7 P 0.000044
AFFX-CreX-3_at 3179.9 P 0.000044
AFFX-DapX-5_at 19.8 A 0.41138
AFFX-DapX-M_at 10.7 A 0.749204
AFFX-DapX-3_at 6.6 A 0.945787
AFFX-LysX-5_at 6.2 A 0.910522
AFFX-LysX-M_at 20.4 A 0.699394
AFFX-LysX-3_at 15.6 A 0.275146
AFFX-PheX-5_at 4.6 A 0.876428
AFFX-PheX-M_at 5.7 A 0.932322
AFFX-PheX-3_at 17.2 A 0.834139
AFFX-ThrX-5_at 9.7 A 0.868639
AFFX-ThrX-M_at 9.3 A 0.699394

Total number of rows: 22283

Table truncated, full table size 579 Kbytes.




Supplementary file Size Download File type/resource
GSM14958.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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