GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Sample GSM14953 Query DataSets for GSM14953
Status Public on Jan 17, 2004
Title IM-6_POST
Sample type RNA
Source name Left Cardiac Ventricle
Organism Homo sapiens
Extracted molecule total RNA
Description 19 paired human left ventricular apex samples were harvested at the time of implant of a left ventricular assist device (PRE) and at the time of explant (POST). The cohort included patients that were clinically classified as "ischemic" (I) showing evidence of coronary artery disease, "non-ischemic" (N) no evidence of coronary artery disease or "acute Myocardial  infarction" (IM) myocardial infarction within 10 days of the implant. Tissue was processed and hybridized to the Affymetrix HG-U133A chip.
Keywords = Heart, Cardiac, Assist Device, LVAD, GATA-4, Sprouty1, microarray, heart failure
Submission date Jan 07, 2004
Last update date Oct 28, 2005
Contact name Grindle M Suzanne
Phone 612-624-2143
Organization name Lillehei Heart Institute
Department Division of Cardiology
Lab Hall Cardiology
Street address Dwan CVRC 289, MMC 508, 420 Delaware Street SE
City Minneapolis
State/province MN
ZIP/Postal code 55455
Country USA
Platform ID GPL96
Series (1)
GSE974 Left ventricular apex samples

Data table header descriptions
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
AFFX-BioB-5_at 90.2 P 0.00844
AFFX-BioB-M_at 134.1 P 0.002867
AFFX-BioB-3_at 53.8 M 0.050229
AFFX-BioC-5_at 204.1 P 0.000446
AFFX-BioC-3_at 119.3 P 0.000581
AFFX-BioDn-5_at 136.8 P 0.000972
AFFX-BioDn-3_at 1421.4 P 0.000195
AFFX-CreX-5_at 1067.5 P 0.000044
AFFX-CreX-3_at 1856.6 P 0.000044
AFFX-DapX-5_at 9.2 A 0.239063
AFFX-DapX-M_at 17.5 A 0.250796
AFFX-DapX-3_at 1.8 A 0.98333
AFFX-LysX-5_at 8.1 A 0.195266
AFFX-LysX-M_at 11.9 A 0.60308
AFFX-LysX-3_at 5.9 A 0.354453
AFFX-PheX-5_at 1.9 A 0.814869
AFFX-PheX-M_at 1.4 A 0.910522
AFFX-PheX-3_at 7.1 A 0.645547
AFFX-ThrX-5_at 2.9 A 0.737173
AFFX-ThrX-M_at 13.1 A 0.5

Total number of rows: 22283

Table truncated, full table size 582 Kbytes.

Supplementary file Size Download File type/resource
GSM14953.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap