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Sample GSM14939 Query DataSets for GSM14939
Status Public on Jan 17, 2004
Title I-4_POST
Sample type RNA
Source name Left Cardiac Ventricle
Organism Homo sapiens
Extracted molecule total RNA
Description 19 paired human left ventricular apex samples were harvested at the time of implant of a left ventricular assist device (PRE) and at the time of explant (POST). The cohort included patients that were clinically classified as "ischemic" (I) showing evidence of coronary artery disease, "non-ischemic" (N) no evidence of coronary artery disease or "acute Myocardial  infarction" (IM) myocardial infarction within 10 days of the implant. Tissue was processed and hybridized to the Affymetrix HG-U133A chip.
Keywords = Heart, Cardiac, Assist Device, LVAD, GATA-4, Sprouty1, microarray, heart failure
Submission date Jan 07, 2004
Last update date Oct 28, 2005
Contact name Grindle M Suzanne
Phone 612-624-2143
Organization name Lillehei Heart Institute
Department Division of Cardiology
Lab Hall Cardiology
Street address Dwan CVRC 289, MMC 508, 420 Delaware Street SE
City Minneapolis
State/province MN
ZIP/Postal code 55455
Country USA
Platform ID GPL96
Series (1)
GSE974 Left ventricular apex samples

Data table header descriptions
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
AFFX-BioB-5_at 69.8 P 0.006187
AFFX-BioB-M_at 195 P 0.000258
AFFX-BioB-3_at 58.2 P 0.005565
AFFX-BioC-5_at 223.4 P 0.000297
AFFX-BioC-3_at 166.4 P 0.000095
AFFX-BioDn-5_at 193.2 P 0.00007
AFFX-BioDn-3_at 1035.1 P 0.000081
AFFX-CreX-5_at 1810.1 P 0.000044
AFFX-CreX-3_at 2655.8 P 0.000044
AFFX-DapX-5_at 3.8 A 0.48511
AFFX-DapX-M_at 5.9 A 0.354453
AFFX-DapX-3_at 0.7 A 0.963431
AFFX-LysX-5_at 0.5 A 0.921998
AFFX-LysX-M_at 11.2 A 0.313723
AFFX-LysX-3_at 0.6 A 0.686277
AFFX-PheX-5_at 1.3 A 0.794268
AFFX-PheX-M_at 1.9 A 0.794268
AFFX-PheX-3_at 4.4 A 0.672921
AFFX-ThrX-5_at 2.5 A 0.794268
AFFX-ThrX-M_at 2.8 A 0.559354

Total number of rows: 22283

Table truncated, full table size 577 Kbytes.

Supplementary file Size Download File type/resource
GSM14939.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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