|
Status |
Public on Aug 08, 2014 |
Title |
DLPFC_OCD_12 |
Sample type |
RNA |
|
|
Source name |
DLPFC
|
Organism |
Homo sapiens |
Characteristics |
rin: 5.6 ocd: OCD rinmatched: 1 dx: OCD ph: 6.77 age: 54.846575 pmi: 27.5 Sex: M race: CAUC batch1: 77
|
Treatment protocol |
Total RNA was extracted from dissected frozen postmortem human brain tissue.
|
Extracted molecule |
total RNA |
Extraction protocol |
Total RNA was extracted from ~ 100 mg of tissue using the RNeasy Kit (Qiagen) according to manufacturer’s protocol.
|
Label |
biotin
|
Label protocol |
Refer to the Illumina DASL Assay System Manual
|
|
|
Hybridization protocol |
Refer to the Illumina DASL Assay System Manual
|
Scan protocol |
Refer to the Illumina DASL Assay System Manual
|
Description |
5591989065_E R5707
|
Data processing |
The raw intensities were exported from GenomeStudio and read into R using the lumi package. Background correction (bgAdjust.affy option), variance stabilizing transform, and quantile normalization were then performed to normalize the data.
|
|
|
Submission date |
Aug 07, 2014 |
Last update date |
Aug 08, 2014 |
Contact name |
Andrew Jaffe |
E-mail(s) |
andrew.jaffe@libd.org
|
Phone |
1-443-287-6864
|
Organization name |
Lieber Institute for Brain Development
|
Department |
Clinical Sciences
|
Street address |
855 N Wolfe St, Ste 300
|
City |
Baltimore |
State/province |
MD |
ZIP/Postal code |
21205 |
Country |
USA |
|
|
Platform ID |
GPL6947 |
Series (1) |
GSE60190 |
Genetic Neuropathology of Obsessive Psychiatric Syndromes |
|