|
| Status |
Public on Aug 08, 2014 |
| Title |
DLPFC_Control_72 |
| Sample type |
RNA |
| |
|
| Source name |
DLPFC
|
| Organism |
Homo sapiens |
| Characteristics |
rin: 6.6
ocd: Control
rinmatched: 0
dx: Control
ph: 6.27
age: 44.731506
pmi: 25.5
Sex: M
race: CAUC
batch1: 76
|
| Treatment protocol |
Total RNA was extracted from dissected frozen postmortem human brain tissue.
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was extracted from ~ 100 mg of tissue using the RNeasy Kit (Qiagen) according to manufacturer’s protocol.
|
| Label |
biotin
|
| Label protocol |
Refer to the Illumina DASL Assay System Manual
|
| |
|
| Hybridization protocol |
Refer to the Illumina DASL Assay System Manual
|
| Scan protocol |
Refer to the Illumina DASL Assay System Manual
|
| Description |
5591989062_C
R5749
|
| Data processing |
The raw intensities were exported from GenomeStudio and read into R using the lumi package. Background correction (bgAdjust.affy option), variance stabilizing transform, and quantile normalization were then performed to normalize the data.
|
| |
|
| Submission date |
Aug 07, 2014 |
| Last update date |
Aug 08, 2014 |
| Contact name |
Andrew Jaffe |
| E-mail(s) |
andrew.jaffe@libd.org
|
| Phone |
1-443-287-6864
|
| Organization name |
Lieber Institute for Brain Development
|
| Department |
Clinical Sciences
|
| Street address |
855 N Wolfe St, Ste 300
|
| City |
Baltimore |
| State/province |
MD |
| ZIP/Postal code |
21205 |
| Country |
USA |
| |
|
| Platform ID |
GPL6947 |
| Series (1) |
| GSE60190 |
Genetic Neuropathology of Obsessive Psychiatric Syndromes |
|
