|
Status |
Public on Aug 08, 2014 |
Title |
GS0001639 |
Sample type |
genomic |
|
|
Source name |
breast cancer tissue
|
Organism |
Homo sapiens |
Characteristics |
gender: Female sample tissue: invasive disease state: breast cancer age: 65.0739726
|
Extracted molecule |
genomic DNA |
Extraction protocol |
not provided
|
Label |
Cy5 and Cy3
|
Label protocol |
Standard Illumina Protocol
|
|
|
Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
|
Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
Description |
Illumina chip: 5808922034 Illumina position: R05C01
|
Data processing |
Touleimat and Tost, Epigenomics 2012
|
|
|
Submission date |
Aug 07, 2014 |
Last update date |
Aug 08, 2014 |
Contact name |
Thomas Fleischer |
E-mail(s) |
thomas.fleischer@rr-research.no
|
Organization name |
Oslo University Hospital
|
Department |
Department of Cancer Genetics, Institute for Cancer Research
|
Street address |
Ullernchausséen 70
|
City |
Oslo |
ZIP/Postal code |
0310 |
Country |
Norway |
|
|
Platform ID |
GPL13534 |
Series (1) |
GSE60185 |
Genome-wide DNA methylation profiles in progression to in situ and invasive carcinoma of the breast with impact on gene transcription and prognosis |
|