NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM144281 Query DataSets for GSM144281
Status Public on Dec 31, 2006
Title Housekeeping gene analysis_CO1
Sample type RNA
 
Source name Colonic mucosa
Organism Homo sapiens
Characteristics Colonic mucosa
Extracted molecule total RNA
Extraction protocol Total RNA was extracted from the sample using TRIzol (Invitrogen) followed by Qiagen RNeasy kit, and the RNA quality assessed using Agilent Bioanalyzer (Agilent Technologies, Palo Alto, CA.) to visually verify the absence of genomic DNA contamination, integrity and ratio of 28S and 18S bands.
Label Cy5
Label protocol http://keck.med.yale.edu/affymetrix/analysis.htm
 
Hybridization protocol http://keck.med.yale.edu/affymetrix/analysis.htm
Scan protocol http://keck.med.yale.edu/affymetrix/analysis.htm
Description N/A
Data processing http://keck.med.yale.edu/affymetrix/analysis.htm
 
Submission date Nov 13, 2006
Last update date Dec 15, 2006
Contact name Mark Kidd
E-mail(s) mkidd01@snet.net
Phone 203 785-5429
Fax 203 737-4067
Organization name Yale University School of Medicine
Department Surgery
Lab Modlin Lab
Street address 333 Cedar Street
City New Haven
State/province CT
ZIP/Postal code 06525
Country USA
 
Platform ID GPL96
Series (1)
GSE6272 House keeping gene analysis - carcinoids and normal mucosa

Data table header descriptions
ID_REF
VALUE RAW DATA

Data table
ID_REF VALUE
200000_s_at 1876.6
200001_at 4946.8
200002_at 11587.7
200003_s_at 15835.9
200004_at 6911.9
200005_at 3410
200006_at 5989.9
200007_at 3823.9
200008_s_at 4030.2
200009_at 6976.2
200010_at 13594.9
200011_s_at 2218.8
200012_x_at 15298.5
200013_at 9104.6
200014_s_at 1457.1
200015_s_at 2481.9
200016_x_at 12032.5
200017_at 11145.3
200018_at 15525.1
200019_s_at 10483

Total number of rows: 22215

Table truncated, full table size 358 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap