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Sample GSM136414 Query DataSets for GSM136414
Status Public on Sep 30, 2007
Title LCM tumor epithelium sample from patient #27
Sample type RNA
Source name human breast cancer tumor epithelium
Organism Homo sapiens
Characteristics diagnosis: non-IBC
status: Deceased
patient_id: 27
race: African American
tnm_stage: IIB
er_status: POS
tissue: Tumor
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: No, ER: POS, Her2Neu: NEG, Stage: IIB, Cyclin E: NEG
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 10.79280163
1053_at 5.646109078
117_at 6.504424305
121_at 8.327301576
1255_g_at 4.229090084
1294_at 8.058090857
1316_at 6.767197904
1320_at 4.891173333
1405_i_at 7.22569251
1431_at 4.064033318
1438_at 6.806821355
1487_at 7.584329305
1494_f_at 6.701950572
1598_g_at 9.676098944
160020_at 7.912581374
1729_at 8.324865092
1773_at 5.139181746
177_at 5.126095685
179_at 8.872173978
1861_at 5.31096861

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136414.CEL.gz 3.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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