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Sample GSM136413 Query DataSets for GSM136413
Status Public on Sep 30, 2007
Title LCM tumor epithelium sample from patient #26
Sample type RNA
Source name human breast cancer tumor epithelium
Organism Homo sapiens
Characteristics diagnosis: non-IBC
status: Deceased
patient_id: 26
race: African American
tnm_stage: I
er_status: NEG
tissue: Tumor
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: No, ER: NEG, Her2Neu: NEG, Stage: I, Cyclin E: POS
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 10.56234743
1053_at 5.731007129
117_at 6.420450406
121_at 8.177013955
1255_g_at 4.117592423
1294_at 7.940406538
1316_at 7.210801638
1320_at 4.888669092
1405_i_at 7.459612643
1431_at 4.224095186
1438_at 6.855207218
1487_at 7.562346031
1494_f_at 6.579045244
1598_g_at 10.06843231
160020_at 7.722925385
1729_at 8.491251575
1773_at 5.173510101
177_at 5.057988126
179_at 8.582154185
1861_at 5.310715104

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136413.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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