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Sample GSM136412 Query DataSets for GSM136412
Status Public on Sep 30, 2007
Title LCM tumor epithelium sample from patient #25
Sample type RNA
Source name human breast cancer tumor epithelium
Organism Homo sapiens
Characteristics diagnosis: non-IBC
status: Deceased
patient_id: 25
race: European American
tnm_stage: IIB
er_status: NEG
tissue: Tumor
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: No, ER: NEG, Her2Neu: NEG, Stage: IIB, Cyclin E: NEG
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 9.804469027
1053_at 5.726440553
117_at 6.725075454
121_at 8.475521449
1255_g_at 4.231316696
1294_at 8.041970022
1316_at 6.978339691
1320_at 4.997990286
1405_i_at 6.399779521
1431_at 4.252505055
1438_at 6.950826547
1487_at 7.449681204
1494_f_at 6.671819742
1598_g_at 10.58344858
160020_at 8.057908635
1729_at 8.126765547
1773_at 5.187503031
177_at 5.609197243
179_at 8.627593404
1861_at 5.240261123

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136412.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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