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Sample GSM136410 Query DataSets for GSM136410
Status Public on Sep 30, 2007
Title LCM tumor epithelium sample from patient #23
Sample type RNA
 
Source name human breast cancer tumor epithelium
Organism Homo sapiens
Characteristics diagnosis: non-IBC
status: Deceased
patient_id: 23
race: European American
tnm_stage: IIB
er_status: POS
tissue: Tumor
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
 
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: No, ER: POS, Her2Neu: NEG, Stage: IIB, Cyclin E: NEG
Data processing RMA
 
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Lab LHC
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Relations
Reanalyzed by GSE47561

Data table header descriptions
ID_REF Affy ID
VALUE RMA log 2 expression levels

Data table
ID_REF VALUE
1007_s_at 10.96013255
1053_at 5.673447412
117_at 6.230986953
121_at 8.169817819
1255_g_at 4.115579575
1294_at 7.72665279
1316_at 6.742339762
1320_at 4.784221058
1405_i_at 5.385601057
1431_at 4.401521931
1438_at 6.687128195
1487_at 7.626705289
1494_f_at 6.663946879
1598_g_at 9.261520957
160020_at 7.830528639
1729_at 8.528589425
1773_at 5.14779442
177_at 5.092418577
179_at 8.710549326
1861_at 5.483596079

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.




Supplementary file Size Download File type/resource
GSM136410.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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