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Sample GSM136409 Query DataSets for GSM136409
Status Public on Sep 30, 2007
Title LCM tumor epithelium sample from patient #22
Sample type RNA
Source name human breast cancer tumor epithelium
Organism Homo sapiens
Characteristics diagnosis: non-IBC
status: Deceased
patient_id: 22
race: European American
tnm_stage: IIB
er_status: POS
tissue: Tumor
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: No, ER: POS, Her2Neu: NEG, Stage: IIB, Cyclin E: NEG
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 10.66930406
1053_at 5.867969751
117_at 6.485272518
121_at 8.286314534
1255_g_at 4.185973213
1294_at 7.936453925
1316_at 6.614483335
1320_at 5.193593143
1405_i_at 6.438456774
1431_at 4.410366897
1438_at 7.079494159
1487_at 7.629524368
1494_f_at 6.806465904
1598_g_at 9.916066115
160020_at 7.615276231
1729_at 7.918688545
1773_at 5.323512973
177_at 5.192117944
179_at 8.754536132
1861_at 5.854020854

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136409.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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