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Sample GSM136400 Query DataSets for GSM136400
Status Public on Sep 30, 2007
Title LCM tumor epithelium sample from patient #15
Sample type RNA
Source name human breast cancer tumor epithelium
Organism Homo sapiens
Characteristics diagnosis: non-IBC
status: Alive
patient_id: 15
race: European American
tnm_stage: IIB
er_status: NEG
tissue: Tumor
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: Yes, ER: NEG, Her2Neu: NEG, Stage: IIB, Cyclin E: POS
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 10.15417428
1053_at 6.193081448
117_at 6.694760176
121_at 8.403065845
1255_g_at 4.533697717
1294_at 8.377911492
1316_at 7.050551371
1320_at 5.091414373
1405_i_at 8.129263061
1431_at 4.120854286
1438_at 6.825646507
1487_at 7.772269901
1494_f_at 6.862975375
1598_g_at 10.65062831
160020_at 7.837938045
1729_at 8.392297291
1773_at 5.562607786
177_at 5.446800585
179_at 9.039240682
1861_at 5.593784531

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136400.CEL.gz 3.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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