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Sample GSM136387 Query DataSets for GSM136387
Status Public on Sep 30, 2007
Title LCM tumor epithelium sample from patient #2
Sample type RNA
Source name human breast cancer tumor epithelium
Organism Homo sapiens
Characteristics diagnosis: non-IBC
status: Alive
patient_id: 2
race: African American
tnm_stage: IIA
er_status: NEG
tissue: Tumor
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: No, ER: NEG, Her2Neu: NEG, Stage: IIA, Cyclin E: POS
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 10.05554317
1053_at 5.795593772
117_at 6.442549227
121_at 8.251293442
1255_g_at 4.212023418
1294_at 8.745971655
1316_at 6.55077548
1320_at 4.804065739
1405_i_at 9.005144311
1431_at 4.117127214
1438_at 6.540321711
1487_at 7.589276467
1494_f_at 6.811964325
1598_g_at 10.29997189
160020_at 7.738208849
1729_at 8.222581536
1773_at 5.251834565
177_at 5.210124761
179_at 8.722439926
1861_at 5.458707459

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136387.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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