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Sample GSM136385 Query DataSets for GSM136385
Status Public on Sep 30, 2007
Title LCM tumor epithelium sample from patient #50
Sample type RNA
Source name human breast cancer tumor epithelium
Organism Homo sapiens
Characteristics diagnosis: IBC
status: Deceased
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: Yes, ER: NEG, Her2Neu: NEG, Stage: IIIB, Clinical IBC: Yes
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 10.46589374
1053_at 6.208880753
117_at 6.317863424
121_at 8.511366184
1255_g_at 4.242639267
1294_at 7.394216811
1316_at 6.877437459
1320_at 5.283548256
1405_i_at 6.366344523
1431_at 4.188366856
1438_at 7.103972097
1487_at 7.681351577
1494_f_at 7.098119265
1598_g_at 9.243892342
160020_at 7.789532946
1729_at 8.351888966
1773_at 5.431092837
177_at 5.080950597
179_at 8.990220738
1861_at 5.630061322

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136385.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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