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Sample GSM136383 Query DataSets for GSM136383
Status Public on Sep 30, 2007
Title LCM tumor epithelium sample from patient #47
Sample type RNA
Source name human breast cancer tumor epithelium
Organism Homo sapiens
Characteristics diagnosis: IBC
status: Deceased
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: Yes, ER: NEG, Her2Neu: NEG, Stage: IV, Clinical IBC: Yes
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 10.67439818
1053_at 5.932213248
117_at 6.159785517
121_at 8.292341156
1255_g_at 4.170135889
1294_at 7.346271585
1316_at 6.493169282
1320_at 5.008867077
1405_i_at 9.293575956
1431_at 4.041802537
1438_at 7.035335086
1487_at 7.1514107
1494_f_at 6.573402363
1598_g_at 10.50783853
160020_at 7.924963202
1729_at 7.724841025
1773_at 5.229603711
177_at 5.318004368
179_at 8.474247421
1861_at 5.123944858

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136383.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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