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Sample GSM136381 Query DataSets for GSM136381
Status Public on Sep 30, 2007
Title LCM tumor epithelium sample from patient #45
Sample type RNA
Source name human breast cancer tumor epithelium
Organism Homo sapiens
Characteristics diagnosis: IBC
status: Deceased
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: No, ER: POS, Her2Neu: POS, Stage: IIIA, Clinical IBC: No
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 11.00410881
1053_at 5.904336096
117_at 6.277389918
121_at 8.284373124
1255_g_at 4.151805065
1294_at 8.235578265
1316_at 7.288266871
1320_at 4.889152042
1405_i_at 6.172135621
1431_at 4.086660617
1438_at 6.718079998
1487_at 7.428584249
1494_f_at 6.938854477
1598_g_at 9.667176827
160020_at 7.849711253
1729_at 8.374073755
1773_at 5.247541764
177_at 5.112581579
179_at 8.688566685
1861_at 6.074427328

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136381.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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