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Sample GSM136380 Query DataSets for GSM136380
Status Public on Sep 30, 2007
Title LCM tumor epithelium sample from patient #44
Sample type RNA
 
Source name human breast cancer tumor epithelium
Organism Homo sapiens
Characteristics diagnosis: IBC
status: Deceased
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
 
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: Yes, ER: POS, Her2Neu: NEG, Stage: IIIB, Clinical IBC: No
Data processing RMA
 
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Lab LHC
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM

Data table header descriptions
ID_REF Affy ID
VALUE RMA log 2 expression levels

Data table
ID_REF VALUE
1007_s_at 11.10515898
1053_at 5.863793123
117_at 6.323773427
121_at 8.280162157
1255_g_at 4.207443426
1294_at 7.361513519
1316_at 6.352602786
1320_at 5.020335365
1405_i_at 6.338727286
1431_at 4.341055583
1438_at 6.900855525
1487_at 7.789962403
1494_f_at 6.804129266
1598_g_at 10.03502132
160020_at 7.929668889
1729_at 8.098391958
1773_at 5.317583553
177_at 5.092895757
179_at 8.819613462
1861_at 5.644936317

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.




Supplementary file Size Download File type/resource
GSM136380.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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