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Sample GSM136376 Query DataSets for GSM136376
Status Public on Sep 30, 2007
Title LCM tumor epithelium sample from patient #40
Sample type RNA
Source name human breast cancer tumor epithelium
Organism Homo sapiens
Characteristics diagnosis: IBC
status: Deceased
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: Yes, ER: POS, Her2Neu: NEG, Stage: IIIA, Clinical IBC: No
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 10.56937061
1053_at 5.706089263
117_at 6.588637151
121_at 8.464933703
1255_g_at 4.132781545
1294_at 8.103272614
1316_at 6.804145092
1320_at 5.169651157
1405_i_at 7.721566357
1431_at 4.129497257
1438_at 6.655623697
1487_at 7.40072785
1494_f_at 6.741426735
1598_g_at 9.513518479
160020_at 7.68639777
1729_at 8.333728254
1773_at 5.335933026
177_at 5.245557705
179_at 8.73355978
1861_at 5.748477556

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136376.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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