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Sample GSM136375 Query DataSets for GSM136375
Status Public on Sep 30, 2007
Title LCM tumor epithelium sample from patient #38
Sample type RNA
Source name human breast cancer tumor epithelium
Organism Homo sapiens
Characteristics diagnosis: IBC
status: Alive
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: Yes, ER: NEG, Her2Neu: NEG, Stage: IIB, Clinical IBC:Yes
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 10.10166864
1053_at 5.676249314
117_at 6.378561295
121_at 8.123237011
1255_g_at 4.122838459
1294_at 8.359360746
1316_at 7.571957025
1320_at 4.947599381
1405_i_at 9.133534934
1431_at 4.15288918
1438_at 6.556178947
1487_at 7.42403886
1494_f_at 6.499059829
1598_g_at 10.1020018
160020_at 7.66588889
1729_at 8.561335772
1773_at 5.131210225
177_at 5.351702624
179_at 8.381051231
1861_at 5.408698904

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136375.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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