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Sample GSM136374 Query DataSets for GSM136374
Status Public on Sep 30, 2007
Title LCM tumor epithelium sample from patient #37
Sample type RNA
 
Source name human breast cancer tumor epithelium
Organism Homo sapiens
Characteristics diagnosis: IBC
status: Deceased
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
 
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: Yes, ER: NEG, Her2Neu: NEG, Stage: IIIA, Clinical IBC: No
Data processing RMA
 
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Lab LHC
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Relations
Reanalyzed by GSE47561

Data table header descriptions
ID_REF Affy ID
VALUE RMA log 2 expression levels

Data table
ID_REF VALUE
1007_s_at 10.6652071
1053_at 6.35716536
117_at 6.345027094
121_at 8.242630935
1255_g_at 4.089750312
1294_at 7.507450751
1316_at 6.49180044
1320_at 4.835390655
1405_i_at 6.66536155
1431_at 4.099808371
1438_at 7.166611368
1487_at 8.0652356
1494_f_at 6.543358041
1598_g_at 9.110949952
160020_at 7.826489541
1729_at 7.648784789
1773_at 5.487450588
177_at 5.239559058
179_at 8.980894769
1861_at 5.505830444

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.




Supplementary file Size Download File type/resource
GSM136374.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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