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Sample GSM136373 Query DataSets for GSM136373
Status Public on Sep 30, 2007
Title LCM tumor epithelium sample from patient #36
Sample type RNA
Source name human breast cancer tumor epithelium
Organism Homo sapiens
Characteristics diagnosis: IBC
status: Deceased
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: Yes, ER: NEG, Her2Neu: U, Stage: IIIB, Clinical IBC: Yes
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 10.84983067
1053_at 5.520101803
117_at 6.147596309
121_at 8.364436282
1255_g_at 4.219711784
1294_at 7.688027998
1316_at 7.029386756
1320_at 5.061861916
1405_i_at 6.619845345
1431_at 4.384940461
1438_at 6.832317671
1487_at 7.800577648
1494_f_at 6.882553648
1598_g_at 10.00300634
160020_at 7.855184249
1729_at 8.362743916
1773_at 5.339252396
177_at 5.203228396
179_at 8.813471765
1861_at 5.381966559

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136373.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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