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Sample GSM136372 Query DataSets for GSM136372
Status Public on Sep 30, 2007
Title LCM stroma sample from patient #31
Sample type RNA
Source name human breast cancer stroma
Organism Homo sapiens
Characteristics diagnosis: non-IBC
status: Deceased
patient_id: 31
race: African American
tnm_stage: IIA
er_status: NEG
tissue: Stroma
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: No, ER: NEG, Her2Neu: NEG, Stage: IIA
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 9.813851058
1053_at 5.128215255
117_at 6.359526777
121_at 8.270237793
1255_g_at 4.019740167
1294_at 8.654488823
1316_at 6.410829444
1320_at 4.456696258
1405_i_at 7.60331354
1431_at 3.974747434
1438_at 6.540756832
1487_at 7.243410719
1494_f_at 6.423690663
1598_g_at 10.38494318
160020_at 7.624774479
1729_at 8.44233638
1773_at 5.136004788
177_at 5.105338975
179_at 8.683202813
1861_at 5.302154847

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136372.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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