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Sample GSM136368 Query DataSets for GSM136368
Status Public on Sep 30, 2007
Title LCM stroma sample from patient #28
Sample type RNA
Source name human breast cancer stroma
Organism Homo sapiens
Characteristics diagnosis: non-IBC
status: Deceased
patient_id: 28
race: African American
tnm_stage: IIB
er_status: NEG
tissue: Stroma
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: No, ER: NEG, Her2Neu: NEG, Stage: IIB
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 10.05710094
1053_at 5.083257219
117_at 6.516452043
121_at 8.070501586
1255_g_at 3.989585104
1294_at 7.515531854
1316_at 6.340364054
1320_at 4.528721241
1405_i_at 6.138383105
1431_at 3.651479989
1438_at 7.078588467
1487_at 7.128825272
1494_f_at 6.224991416
1598_g_at 10.20465776
160020_at 7.572072561
1729_at 8.227482646
1773_at 5.134135513
177_at 4.936986514
179_at 8.363641168
1861_at 5.548360926

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136368.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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