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Sample GSM136365 Query DataSets for GSM136365
Status Public on Sep 30, 2007
Title LCM stroma sample from patient #26
Sample type RNA
Source name human breast cancer stroma
Organism Homo sapiens
Characteristics diagnosis: non-IBC
status: Deceased
patient_id: 26
race: African American
tnm_stage: I
er_status: NEG
tissue: Stroma
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: No, ER: NEG, Her2Neu: NEG, Stage: I
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 9.754838504
1053_at 4.829999071
117_at 6.200463628
121_at 7.689262626
1255_g_at 3.856190796
1294_at 7.801968875
1316_at 6.368792252
1320_at 4.794756592
1405_i_at 6.004143609
1431_at 4.082762402
1438_at 6.46553011
1487_at 7.24964365
1494_f_at 6.411452581
1598_g_at 9.856201446
160020_at 7.348046101
1729_at 8.339665491
1773_at 5.122086512
177_at 5.055677524
179_at 8.347313932
1861_at 5.082770521

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136365.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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