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Sample GSM136363 Query DataSets for GSM136363
Status Public on Sep 30, 2007
Title LCM stroma sample from patient #24
Sample type RNA
 
Source name human breast cancer stroma
Organism Homo sapiens
Characteristics diagnosis: non-IBC
status: Deceased
patient_id: 24
race: African American
tnm_stage: IIA
er_status: POS
tissue: Stroma
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
 
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: No, ER: POS, Her2Neu: U, Stage: IIA
Data processing RMA
 
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Lab LHC
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Relations
Reanalyzed by GSE47561

Data table header descriptions
ID_REF Affy ID
VALUE RMA log 2 expression levels

Data table
ID_REF VALUE
1007_s_at 9.770832798
1053_at 4.984457292
117_at 6.006820992
121_at 7.910296945
1255_g_at 4.222479452
1294_at 7.695499983
1316_at 6.088841068
1320_at 4.795417465
1405_i_at 7.174564026
1431_at 3.791044706
1438_at 6.664863265
1487_at 7.269750145
1494_f_at 6.629187574
1598_g_at 9.51400194
160020_at 7.388175322
1729_at 7.628518716
1773_at 5.147803628
177_at 5.029752734
179_at 8.516810092
1861_at 5.252998325

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.




Supplementary file Size Download File type/resource
GSM136363.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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