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Sample GSM136362 Query DataSets for GSM136362
Status Public on Sep 30, 2007
Title LCM stroma sample from patient #23
Sample type RNA
Source name human breast cancer stroma
Organism Homo sapiens
Characteristics diagnosis: non-IBC
status: Deceased
patient_id: 23
race: European American
tnm_stage: IIB
er_status: POS
tissue: Stroma
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: No, ER: POS, Her2Neu: NEG, Stage: IIB
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 9.759093669
1053_at 4.81708635
117_at 6.168958845
121_at 8.190382991
1255_g_at 4.022694278
1294_at 7.911590983
1316_at 6.926866932
1320_at 4.512176447
1405_i_at 5.723222384
1431_at 3.918432173
1438_at 6.255969779
1487_at 7.496784115
1494_f_at 6.524082691
1598_g_at 10.28345687
160020_at 7.588786796
1729_at 8.297879458
1773_at 5.110957652
177_at 5.043190133
179_at 8.59231077
1861_at 5.442712129

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136362.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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