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Sample GSM136361 Query DataSets for GSM136361
Status Public on Sep 30, 2007
Title LCM stroma sample from patient #22
Sample type RNA
Source name human breast cancer stroma
Organism Homo sapiens
Characteristics diagnosis: non-IBC
status: Deceased
patient_id: 22
race: European American
tnm_stage: IIB
er_status: POS
tissue: Stroma
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: No, ER: POS, Her2Neu: NEG, Stage: IIB
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 9.791769874
1053_at 4.961437437
117_at 6.352029843
121_at 7.92863725
1255_g_at 3.948773186
1294_at 7.555783813
1316_at 6.573697053
1320_at 4.630854951
1405_i_at 5.822717454
1431_at 3.764912941
1438_at 6.300134516
1487_at 7.089432584
1494_f_at 6.312714977
1598_g_at 9.469971793
160020_at 7.243775138
1729_at 7.810366785
1773_at 4.964625332
177_at 5.004244567
179_at 8.458917519
1861_at 5.752758558

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136361.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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