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Sample GSM136358 Query DataSets for GSM136358
Status Public on Sep 30, 2007
Title LCM stroma sample from patient #19
Sample type RNA
Source name human breast cancer stroma
Organism Homo sapiens
Characteristics diagnosis: non-IBC
status: Deceased
patient_id: 19
race: African American
tnm_stage: IIB
er_status: NEG
tissue: Stroma
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: No, ER: NEG, Her2Neu: POS, Stage: IIB
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 9.676360891
1053_at 5.034747878
117_at 6.444137191
121_at 7.936213797
1255_g_at 3.872101974
1294_at 7.970500599
1316_at 6.487240244
1320_at 4.66008895
1405_i_at 7.516751965
1431_at 3.808490878
1438_at 6.813505551
1487_at 6.97721381
1494_f_at 6.471119738
1598_g_at 10.46863038
160020_at 7.415614406
1729_at 8.223368834
1773_at 5.049331194
177_at 5.056868369
179_at 8.387613124
1861_at 5.501865227

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136358.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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