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Sample GSM136356 Query DataSets for GSM136356
Status Public on Sep 30, 2007
Title LCM stroma sample from patient #17
Sample type RNA
Source name human breast cancer stroma
Organism Homo sapiens
Characteristics diagnosis: non-IBC
status: Deceased
patient_id: 17
race: European American
tnm_stage: I
er_status: POS
tissue: Stroma
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: No, ER: POS, Her2Neu: NEG, Stage: I
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 9.053692848
1053_at 4.865836742
117_at 6.26776793
121_at 8.105081321
1255_g_at 4.237739663
1294_at 7.985689498
1316_at 6.708365552
1320_at 4.584437999
1405_i_at 6.621001049
1431_at 3.962877127
1438_at 6.567649226
1487_at 7.011584335
1494_f_at 6.403922297
1598_g_at 10.44631753
160020_at 7.623736529
1729_at 7.882935917
1773_at 5.016288371
177_at 5.366386524
179_at 8.424236424
1861_at 5.219939986

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136356.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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