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Sample GSM136352 Query DataSets for GSM136352
Status Public on Sep 30, 2007
Title LCM stroma sample from patient #15
Sample type RNA
Source name human breast cancer stroma
Organism Homo sapiens
Characteristics diagnosis: non-IBC
status: Alive
patient_id: 15
race: European American
tnm_stage: IIB
er_status: NEG
tissue: Stroma
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: Yes, ER: NEG, Her2Neu: NEG, Stage: IIB
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 9.44679562
1053_at 5.249176939
117_at 6.177545239
121_at 8.039636359
1255_g_at 4.165754166
1294_at 8.194395063
1316_at 6.438946314
1320_at 4.533549499
1405_i_at 6.883750473
1431_at 3.936128462
1438_at 6.505870687
1487_at 7.251452725
1494_f_at 6.525664352
1598_g_at 11.05596546
160020_at 7.615733326
1729_at 8.343086789
1773_at 5.187246567
177_at 5.154199229
179_at 8.767486925
1861_at 5.604058595

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136352.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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