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Sample GSM136326 Query DataSets for GSM136326
Status Public on Sep 30, 2007
Title LCM stroma sample from patient #37
Sample type RNA
 
Source name human breast cancer stroma
Organism Homo sapiens
Characteristics diagnosis: IBC
status: Deceased
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
 
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: Yes, ER: NEG, Her2Neu: NEG, Stage: IIIA, Clinical IBC: No
Data processing RMA
 
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Lab LHC
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Relations
Reanalyzed by GSE47561

Data table header descriptions
ID_REF Affy ID
VALUE RMA log 2 expression levels

Data table
ID_REF VALUE
1007_s_at 10.45027631
1053_at 5.719465738
117_at 5.938663664
121_at 8.023052396
1255_g_at 3.95480312
1294_at 7.909004501
1316_at 6.501012693
1320_at 4.467829266
1405_i_at 6.98704598
1431_at 3.784428463
1438_at 6.337194745
1487_at 7.649626698
1494_f_at 6.279660537
1598_g_at 9.539731886
160020_at 7.531693999
1729_at 8.111136115
1773_at 5.243959488
177_at 4.809449429
179_at 8.78018542
1861_at 5.788352101

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.




Supplementary file Size Download File type/resource
GSM136326.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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