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Sample GSM1303521 Query DataSets for GSM1303521
Status Public on Jun 30, 2014
Title CNL01i-ipsc on AM - differentiated
Sample type genomic
Source name corneal
Organism Homo sapiens
Characteristics individual: patient 14
cell type: ips derived cell line
sample condition: ips derived cell line; patient 14; on AM
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation 450k Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description CNL01i-ipsc on AM - differentiated
genomic DNA from cell lines
Data processing BeadStudio software v3.2
Submission date Jan 08, 2014
Last update date Jun 30, 2014
Contact name Jie Tang
Organization name Cedars Sinai Medical Center
Street address 8700 Beverly Blvd
City Los Angeles
ZIP/Postal code 90048
Country USA
Platform ID GPL13534
Series (1)
GSE53918 Differentiation of human limbal-derived induced pluripotent stem cells into limbal-like epithelium

Data table header descriptions
VALUE Average Beta

Data table
cg00000029 0.818013367
cg00000108 0.939265819
cg00000109 0.865798524
cg00000165 0.057523092
cg00000236 0.888411568
cg00000289 0.736297279
cg00000292 0.853856519
cg00000321 0.170257075
cg00000363 0.07684768
cg00000622 0.02222814
cg00000658 0.813897974
cg00000714 0.214400631
cg00000721 0.917567346
cg00000734 0.047893369
cg00000769 0.040932402
cg00000807 0.784269232
cg00000884 0.859267944
cg00000905 0.06708682
cg00000924 0.460447075
cg00000948 0.855160365

Total number of rows: 485577

Table truncated, full table size 10864 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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