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Sample GSM1303520 Query DataSets for GSM1303520
Status Public on Jun 30, 2014
Title 83i-ipsc on AM - differentiated
Sample type genomic
Source name corneal
Organism Homo sapiens
Characteristics individual: patient 83
cell type: ips derived cell line
sample condition: ips derived cell line; patient 83; on AM
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation 450k Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description 83i-ipsc on AM - differentiated
genomic DNA from cell lines
Data processing BeadStudio software v3.2
Submission date Jan 08, 2014
Last update date Jun 30, 2014
Contact name Jie Tang
Organization name Cedars Sinai Medical Center
Street address 8700 Beverly Blvd
City Los Angeles
ZIP/Postal code 90048
Country USA
Platform ID GPL13534
Series (1)
GSE53918 Differentiation of human limbal-derived induced pluripotent stem cells into limbal-like epithelium

Data table header descriptions
VALUE Average Beta

Data table
cg00000029 0.760350635
cg00000108 0.910994113
cg00000109 0.635354985
cg00000165 0.166884991
cg00000236 0.682803966
cg00000289 0.361758625
cg00000292 0.877293715
cg00000321 0.12725017
cg00000363 0.050928241
cg00000622 0.018101593
cg00000658 0.766607054
cg00000714 0.19776423
cg00000721 0.791709669
cg00000734 0.033632407
cg00000769 0.040896922
cg00000807 0.717270572
cg00000884 0.766812171
cg00000905 0.125223348
cg00000924 0.435891935
cg00000948 0.903526727

Total number of rows: 485577

Table truncated, full table size 10862 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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